39th Annual J.P. Morgan Healthcare Conference

Sean McCarthy, D.Phil.

President, Chief Executive Officer, and Chairman

JANUARY 14, 2021

© 2021 CytomX Therapeutics, Inc.

Conditionally-Active Antibody Therapeutics

for the treatment of cancer

© 2020 CytomX Therapeutics, Inc.

Forward-Looking Statements

This presentation may contain projections and other forward-looking statements regarding future events. All statements other than statements of historical facts contained in this presentation, including statements regarding our future financial condition, technology platform, development strategy, prospective products, preclinical and clinical pipeline and milestones, regulatory objectives, expected payments from and outcomes of collaborations, and likelihood of success, are forward-looking statements. Such statements are predictions only and involve known and unknown risks, uncertainties and other important factors that may cause our actual results, performance or achievements to be materially different from any future results, performance or achievements expressed or implied by the forward-looking statements. These risks and uncertainties include, among others, the costs, timing and results of preclinical studies and clinical trials and other development activities; the uncertainties inherent in the initiation and enrollment of clinical trials; the uncertainties associated with the COVD-19 pandemic; expectations of expanding on-going clinical trials; availability and timing of data from clinical trials; the unpredictability of the duration and results of regulatory review; market acceptance for approved products and innovative therapeutic treatments; competition; the potential not to receive partnership milestone, profit sharing or royalty payments; the possible impairment of, inability to obtain and costs of obtaining intellectual property rights; and possible safety or efficacy concerns, general business, financial and accounting risks and litigation. Because forward-looking statements are inherently subject to risks and uncertainties, some of which cannot be predicted or quantified and some of which are beyond our control, you should not rely on these forward-looking statements as predictions of future events. More information concerning us and such risks and uncertainties is available on our website and in our press releases and in our public filings with the U.S. Securities and Exchange Commission. We are providing this information as of its date and do not undertake any obligation to update or revise it, whether as a result of new information, future events or circumstances or otherwise. Additional information may be available in press releases or other public announcements and public filings made after the date of this presentation.

This presentation concerns products that have not yet been approved for marketing by the U.S. Food and Drug Administration (FDA). No representation is made as to their safety or effectiveness for the purposes for which they are being investigated.

3

Company Snapshot

Conditionally-Active Antibodies

Key 2021 Milestones

Clinical-Stage

Oncology Focused

Biopharma Company

  • Innovative targeting strategy
  • Leverages tumor microenvironment
  • Opens previously undruggable target space
  • Leaders in field
  • CX-2009initial Phase 2 data in breast cancer
  • CX-2029initial Phase 2 expansion cohort data
  • Next IND filings

Foundational Partnerships

Strong Balance Sheet

AbbVie, Amgen, Astellas & BMS

$321M cash at end of Q3 2020

Retained certain US rights

No debt

4

Experienced Leadership

Sean A. McCarthy, D. Phil.

President, Chief Executive Officer and Chairman

>20 years of experience in biotech with roles in R&D, business development, financing and general management

Amy C. Peterson, M.D.

EVP, Chief Development Officer

>15 years of leadership experience in oncology drug development

Alison L. Hannah, M.D.

SVP, Chief Medical Officer

>30 years of experience in investigational cancer therapy development

Carlos Campoy

SVP, Chief Financial Officer

>30 years of financial and leadership experience, mostly with publicly-held healthcare and biopharmaceutical companies

Marcia P. Belvin, Ph.D.

SVP, Head of Research

>20 years of experience in preclinical pipeline discovery and development in oncology

5

Broad Clinical and Preclinical Pipeline with Multiple Phase 2 Readouts 2021+

CONDITIONAL ADCs

IMMUNO- ONCOLOGY

PRODUCT

PROBODY

INDICATION

IND-ENABLING

PHASE 1

PHASE 2

COMMERCIAL RIGHTS

CANDIDATE

TARGET

Breast

Arm A: monotherapy in advanced, metastatic HR+/HER2 non-amplified BC

Initial Data

CX-2009

CD166-DM4

Arm B: monotherapy in advanced, metastatic TNBC

Expected

Cancer

Arm C: in combination with CX-072 in advanced, metastatic TNBC

Q4 2021

Cohort 1: sqNSCLC

Initial Data

Initial

Multiple

Cohort 2: HNSCC

CX-2029

CD71-MMAE

Expected

Cohorts

Cohort 3: Esophageal cancer

Cohort 4: DLBCL

Q4 2021

2021

CX-2043

EpCAM-

Solid

Target IND 2021

DM21

Tumors

BMS-986249

CTLA-4

1L

Randomized: + nivolumab vs. ipilimumab + nivolumab vs. nivolumab

Melanoma

BMS-986288

CTLA-4

Solid

Dose escalation: +/- nivolumab

a-Fucosylated

Tumors

EGFR + CD3

CX-904

T-Cell

TBA

Target IND 2021

Bispecific

6

The Probody® Therapeutic Platform:

Conditionally-Active Antibodies

Less

Binding in

Normal

Tissues

Protease

Substrate

Protease

linker

Mask

More

Binding

in Tumors

Target

"Masking" limits ability of conditionally-active

Proteases in tumor microenvironment "unmask" conditionally-active antibody,

antibody to bind to healthy tissues

allowing more binding to tumor cells

Antibody-

Immune Modulator/

T-Cell

Drug Conjugate

Checkpoint Inhibitor

Bispecific

Linker-payload

Healthy Tissue

Anti-Tumor

Anti-CD3

7

Antibody-Drug Conjugates for Cancer are a Major Opportunity

Recent Approvals and Transactions Underscore High Potential of Class

8

Probody Drug Conjugates Expand ADC Target Landscape

Antibody-

Limited

druggable space

drug

for conventional

conjugates

ADCs

Broad

Convert

opportunity

undruggable

target to

for new

druggable target

first in class

by opening

therapies

CytomX PDCs

therapeutic

window

9

CX-2009(Praluzatamab ravtansine)

Anti-CD166 Conditional ADC for HER2 non-Amplified Breast Cancer

10

Substantial Unmet Need Remains in Breast Cancer

30% ~42k

Breast cancer is the 2nd leading cause of cancer deaths in women1

of all cancer in females with an estimated ~276k new cases and

deaths in the United States in 2020

  • ~80% of breast cancer is HER2 non-amplified
  • Despite recent advances, new therapies are needed, especially in the metastatic setting
  • CD166 is broadly and highly expressed in HER2 non-amplified breast cancer

1. Cancer Statistics, 2020; Siegel CA Cancer J Clin 2020;70:7-30

11

CX-2009: A Probody Drug Conjugate Targeting CD166 (ALCAM*)

CX-2009

DM4 PAYLOAD

ANTIBODY

SUBSTRATE

LINKER

MASK

PROTEASE

DAR ~ 4

CD166

CANCER CELL

CD166

Expression

by IHC

  • CD166 expression in normal cells limits development of a conventional ADC (e.g., Lung, GI tissues, Liver)
  • CX-2009is a first-in-classanti-CD166 Probody conjugated to the maytansinoid cytotoxic payload DM4
  • Designed to target CD166 towards tumor tissue, away from healthy tissue
  • CD166 expressed on many other cancer types future opportunity (e.g., Ovarian, Lung, HNSCC)

Breast Cancer

Lung Cancer

Ovarian Cancer

* ALCAM - Activated Leukocyte Cell Adhesion Molecule

12

Phase 1 Enrolled 39 Patients with Breast Cancer at Doses 0.25-10 mg/kg

CD166 Expression (H-Score) in

Breast Cancer Patients

High

Low

HR+/HER2- : Hormone Receptor positive and HER2 non-amplified breast cancer;

TNBC: Triple negative breast cancer

Data presented SABCS 2020, ASCO 2020

Data Cutoff: August 2020

13

Change in Target Lesions Size (%)

Observed Clinical Activity in Breast Cancer with CX-2009 at Doses ≥4 mg/kg Q3W

Breast cancer patients with measurable disease who received ≥ 4 mg/kg CX-2009 and had a post-baseline assessment

HR+/Her2-

(%)

BaselinefromBurdenTumorin

TNBC

Change

**Dose reduced (to 4 Q2W).

*Patient still on study.

Percent

**

#PD in non-target/new lesions.

**

Best Response in Target Lesions

CR in target lesions

Weeks Since Treatment Initiation

Evaluable* Breast Cancer Patients

Overall

HR+/HER2-

TNBC

Parameter

(n=32)

(n=22)

(n=10)

CBR16

13 (41%)

9

4

CBR24

9 (28%)

5 (2 cPR)

4 (3 uPR)

CBR= clinical benefit rate (CR, PR or SD for 16 or 24 wks); cPR= confirmed partial response;

uPR= unconfirmed Partial Response

Data presented SABCS 2020

*Includes those with non-measurable but evaluable (e.g. bone-only) disease

14

Partial Response to CX-2009 in Patient with TNBC Refractory to Pembrolizumab+Paclitaxel and to Sacituzumab Govitecan

BASELINE

Week 8

Week 16

  • 41-year-oldtreated at 8 mg/kg
  • Prior treatment for metastatic disease:
    • Pembrolizumab + paclitaxel (best response = PD)
    • Sacituzumab govitecan (best response = PD)
  • Baseline: ulcerating skin lesions on chest wall and axillary nodal metastasis
  • First scan (Week 8): 48% reduction in target lesions
  • Dose interruption (week 9 -16) for keratitis (resolved), disease progressed before treatment could be re-initiated

Data presented SABCS 2020

15

CX-2009: Phase 1 Tolerability Supports Phase 2 Dose of 7 mg/kg

RP2D

< 6

7 mg/kg

8 mg/kg

9 mg/kg

10

mg/kg

mg/kg

(n=12)

(n=22)

(n=9)

(n=38)

(n=8)

TRAE (Grade 3+)

16%

33%

64%

56%

50%

TEAE leading to

13%

8%

14%

22%

13%

Discontinuation

DLT (n)

0

0

1

0

0

TR SAEs

0

17%

27%

22%

13%

Ocular Toxicity (any

26%

25%

59%

56%

75%

grade)*

Ocular Toxicity

3%

0

14%

33%

13%

(Grade 3+)

RP2D= Recommended Phase 2 Dose

*Ocular prophylaxis was optional; future studies will incorporate mandatory ocular prophylaxis

CX-2009 was generally well tolerated at doses ≤ 7 mg/kg (toxicity profile consistent with payload: ocular, neuropathic and hepatic)

Ocular toxicities appeared dose dependent in frequency and severity

Selection of 7 mg/kg Q3W as RP2D is supported by activity, tolerability and PK/PD modeling

Data presented SABCS 2020

Data cut-off: August 2020

16

CX-2009 Breast Cancer Phase 2 Study Design

Monotherapy (7mg/kg Q3W) and Combination with Pacmilimab (CX-072;anti-PD-L1)

In Advanced, HER2 non-Amplified Breast Cancer

Key Eligibility

Ocular prophylaxis required

HR+/HER2 non-amplified

  • 0 - 2 prior cytotoxics for advanced disease
  • Measurable disease required
  • No active corneal disease

TNBC

  • CD166 High
  • ≥ 1 and ≤ 3 priors for advanced disease
  • Measurable disease required
  • Treated/stable brain metastases allowed
  • No active corneal disease
  • Arm C exclusion criteria:
    • PD-L1negative/unknown
    • I/O refractory
    • History of or active autoimmune condition

Breast Cancer SubType

Arm A

HR+/HER2 non-amp (n~40*)

CX-2009

Arm B

TNBC (n~40*)

CX-2009

Arm C

TNBC (n~40*)

CX-2009 + CX-072**

Endpoints

Primary: Overall Response Rate (ORR) by central review

Secondary: ORR (Inv), PFS, DCR, CBR24, DoR, OS, Safety, PK, ADA

Exploratory: Biomarker correlation with outcome

Readout: Initial data expected Q4 2021

*Evaluable, **https://meetinglibrary.asco.org/record/186711/abstract

17

CX-2029

Anti-CD71 (Transferrin Receptor) Conditional ADC

18

CD71 (Transferrin Receptor)

  • Highly expressed tumor antigen
  • "Professional internalizer" ideally suited to delivery of cytotoxic payloads to cancer cells
  • Undruggable target with conventional antibody approaches due to normal tissue biology
  • Probody strategy - open therapeutic window by limiting normal tissue binding
  • Potentially paradigm shifting anti-cancer agent with first in class potential

Elliott and Head. J Cancer Ther. 2012;3:278-311.

LUNGHNSCC

ESOPHAGEAL LYMPHOMA

CD71

Expression

by IHC

19

CX-2029: Potentially Paradigm Shifting Anti-Cancer Agent

DAR = 2

  • Unmasked ADC is lethal in preclinical models at sub-therapeutic doses
  • Therapeutic range for CX-2029 conditional ADC predicted in patients 2-4 mg/kg
  • Hematologic toxicity dose limiting in preclinical studies

Tumor Volume (mm3) Mean +/- SEM

2500HNSCC

2000

1500

Vehicle

1000

500

CX-2029

0

0

20

40

60

80

Days Post 1st Dose

20

Phase 1 Dose Escalation Study Evaluated CX-2029 Q3W in 45 Patients with Solid Tumors

5 mg/kg n=4

4 mg/kg n=6

3 mg/kg n=12

2 mg/kg n=8

0.1-1.0 mg/kg n=15

Below Dose Predicted

to be Biologically Active

Key Eligibility Criteria

  • Metastatic or locally advanced unresectable solid tumor
  • Archival tissue or biopsy available for tissue analyses
  • Stable brain metastases permitted

Exclusions:

  • Transfusion-dependentanemia or iron metabolism disorders
  • Grade 2 or higher neuropathy

Key Patient Demographics

All Cohorts

(n=45)

Age, median (min, max)

60 (31, 75)

Baseline ECOG 0 / 1, %

29 / 71

CD71 IHC staining, n (%)

High expression [2+/3+]

15

(33)

Low expression [0/1+]

16

(36)

Unknown

14

(31)

Tumor types, n (%)

NSCLC

9 (20)

Squamous NSCLC

4

(9)

HNSCC

8 (18)

Colorectal cancer

7 (16)

Other*

21

(46)

Median priors (min, max)

3 (1, 16)

*Other tumor types include sarcoma (4), Prostate (3), parotid gland (3); ovarian (2); melanoma (n=1); endometrial (1); hepatocellular (1); mesothelioma (1); ocular melanoma (1); pancreatic (1); perivascular epithelioid (1); thymoma (1); thyroid (1).

21

Observed Clinical Activity with CX-2029 at Doses ≥2 mg/kg Q 3 Weeks

Patients with measurable disease who received ≥ 2 mg/kg CX-2029 and had a post-baseline assessment

* * *

* Denotes patients still on treatment

*Confirmed Partial Responses in HNSCC and sqNSCLC

Best Response in Target Lesions

CRC=Colorectal Cancer, HCC=Hepatocellular carcinoma, aNSC=Non-small cell lung adenocarcinoma, TC=Thyroid carcinoma MPM=Malignant pleural mesothelioma, HN=Head and neck squamous cell carcinoma, PAC=Pancreatic cancer, PEC=Perivascular epithelioid cell tumor, sNSC=Non-small cell lung squamous carcinoma

Data cut-off: August 2020

22

Observed Clinical Activity in sqNSCLC and HNSCC with CX-2029

at Doses ≥2 mg/kg Q 3 Weeks

sqNSCLC or HNSCC patients with measurable disease, received ≥ 2 mg/kg CX-2029, and had a post-baseline assessment

Lesions

(%)

Dose Level:

2 mg/kg

3 mg/kg

5 mg/kg

TumorBurden (%)

Dose Level:

2 mg/kg

3 mg/kg

5 mg/kg

Response: PR SD PD

in Sum of Target

from Baseline

Change

HNSCC

HNSCC HNSCC

sqNSCLC HNSCC

HNSCC

HNSCC

sqNSCLC

Best Response in Target Lesions

sqNSCLC

HNSCC

Change in

from Baseline

Percent

*Denotes patients still on treatment

Weeks Since Treatment Initiation

1 patient with sqNSCLC was dosed at 1 mg/kg; 1 patient with HNSCC came off study without a post-baseline assessment

Data cut-off: August 2020

23

CX-2029 Case Study: Patient with HNSCC

  • Nasopharyngeal carcinoma (Diagnosed in February 2018)
  • Prior therapies: docetaxel/5FU/cisplatin with radiation; high-dose cisplatin; investigational agent (sEphB4-HSA) + pembrolizumab (best response was PD)
  • CX-2029treatment initiated (January 2020)
  • Partial response at Week 8 confirmed 8 weeks later. Dose reduced to 2 mg/kg; additional shrinkage of liver target lesion seen.

18 Dec 2019

13 Mar 2020 (43% ↓)

28 Aug 2020 (84% )

Baseline

Week 8

Week 27

Data cut-off: August 2020.

24

CX-2029 Phase 1 Tolerability Supports Phase 2 Dose of 3mg/kg

Generally Well Tolerated to 3 mg/kg with Manageable Adverse Events

RP2D

Treatment-Related

1.0

2.0

3.0

4.0

5.0

Grade 3+ AEs

> 90% masking maintained in circulation

mg/kg

mg/kg

mg/kg

mg/kg

mg/kg

(≥2 patients)

(n=3)

(n=8)

(n=12)

(n=6)

(n=4)

Most frequent Grade 3+ AE was anemia

Anemia

33%

63%

58%

83%

100%

- Managed with red blood cell

transfusions, growth factor support

Neutropenia

0

0

33%

50%

75%

and/or dose delays/reductions

- Likely multi-factorial including CD71

Leukopenia

0

0

8%

33%

50%

biology and MMAE payload

Infusion-related

3 mg/kg Q3W selected as Phase 2 dose

0

13%

0

17%

0

reaction

Data cut-off: August 2020

25

Phase 2 Expansion Underway to Evaluate CX-2029 in Four Cohorts

Monotherapy at 3 mg/kg Q3W

Eligibility

Cancer Type

Endpoints

sqNSCLC, HNSCC and esophageal

  • Prior therapy must include prior platinum and a checkpoint inhibitor (alone or in combination; if approved by the local Health Authority).
  • For esophageal: squamous, adenocarcinoma or GE junction; prior HER2-targeted therapy if tumor is HER2+
  • Documented progression after at least one prior regimen for advanced disease

DLBCL

  • Progression after at least 2 prior regimens (one of which must be anti-CD20 based therapy); not a candidate for stem cell transplant

sqNSCLC

n~25*

HNSCC

n~25*

Esophageal/GEJ

n~25*

DLBCL

n~25*

*Evaluable

Primary: Overall Response Rate (ORR) by local investigator

Secondary: PFS, DCR, CBR24, DoR, OS, Safety, PK, ADA, TTR

Exploratory: Biomarker correlation with outcome

Readout: Initial data expected Q4 2021

26

CX-2043

Anti-EpCAM(TROP-1) Conditional ADC

27

CX-2043: Conditional ADC Targeting EpCAM/TROP-1

CX-2043

DM21 linker- payload

DAR ~ 4

EPCAM

  • CX-2043generated in collaboration with Immunogen
  • CytomX retains WW development and commercial rights

Target Background

  • Epithelial cell marker; Highly expressed on solid tumors
  • EpCAM-targetedtherapies can be active when delivered locally
  • On-target /off-tumor toxicities limit systemic delivery

CX-2043:EpCAM-targeting PDC

  • Next-generationlinker-payload system with enhanced stability and improved bystander activity
  • Probody platform alleviates on-target /off-tumor toxicity (pancreatitis, GI tox)

Presented at EORTC-NCI-AACR 2020

28

Alliances and Financials

29

Strong Alliances Advancing Multiple Programs and Probody Formats

CHECKPOINT INHIBITORS

PROBODY

T-CELL

T-CELL

DRUG CONJUGATES

BISPECIFICS

BISPECIFICS

LEAD PROGRAMS: Expanding

LEAD PROGRAM: CD71 (CX-2029)

LEAD PROGRAM: CX-904

Conditional T-Cell Bispecifics

Therapeutic Window for CTLA-4

Global co-development alliance

EGFR-CD3 conditional T-Cell

Alliance formed March 2020

BMS-986249 ipilimumab

bispecific

Probody in melanoma Phase 2

CytomX retained US rights (35%)

$80 million upfront

and >20% royalties ex-US

IND enabling studies for

BMS-986288non-fucosylated

potential 2021 IND

ipilimumab Probody in Phase 1

30

Strong Balance Sheet to Support Pipeline and Operations

$321M in cash as of Sept. 30th 2020

$130M of non-dilutive capital in 2020

  • $80M upfront from Astellas
  • $40M CX-2029 milestone from AbbVie
  • $10M anti-CTLA-4 milestone from BMS

No debt

46.2M shares outstanding

31

Leadership in Conditionally-Active Antibodies with Validated Platform

Summary

  • Versatile, multi-modality platform
  • Five clinical stage assets
  • 2 conditional ADCs in Phase 2
    • CX-2009,CX-2029
  • 2 conditional checkpoint inhibitors in Phase 2
    • CX-072(+ CX-2009)
    • BMS-986249
  • Emerging T-cell bispecifics
  • Robust platform and preclinical pipeline
  • Strong alliances

2021

Priorities

  • Patient enrollment into CX-2009 Ph 2 study
    • HR+/HER2 non-amplified breast cancer
    • TNBC +/‒ CX-072
    • Initial data expected Q4 2021
  • Patient enrollment into CX-2029 Ph 2 expansions
    • sqNSCLC, HNSCC, esophageal, DLBCL
    • Initial data expected Q4 2021
  • IND submission
    • CX-2043
    • CX-904
  • Continued progress within partnerships

32

CytomX Therapeutics Inc.

Our

Our

Our

Our

VISION

PLATFORM

PRODUCTS

TOMORROW

Create

a new approach to the treatment of cancer by improved tumor targeting

Lead

in conditional activation of antibody-drug conjugates and other modalities

Advance

Build

a broad clinical pipeline of

a long-term, commercial

anti-cancer therapies in areas

stage, multi-product

of significant unmet need

enterprise

PROBODY is a U.S. registered trademark of CytomX Therapeutics, Inc. All other brands and trademarks referenced

herein are the property of their respective owners.

33

Questions and Answers

© 2021 CytomX Therapeutics, Inc.

34

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CytomX Therapeutics Inc. published this content on 14 January 2021 and is solely responsible for the information contained therein. Distributed by Public, unedited and unaltered, on 14 January 2021 21:05:03 UTC